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  • Marine Ecology: Microbial Processes
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Estimation of the microbial biomass in tidal flat sediment by fumigation-extraction

Abstract

A transect of ten profiles was laid out in 20 m intervals on a tidal sand flat approximately 100 m from the east shore of Sylt until the next tideway was reached. Sediment samples were taken from 0–2 cm depth (oxic layer) and 2–4 cm depth (anoxic layer). The average content of organic carbon (C) was 2.41 mg g−1 in the oxic layer and 1.86 mg g−1 in the anoxic layer. The organic C content correlated positively with non-biomass C, 0.5M K2SO4 extractable C, total nitrogen (N), cation exchange capacity (CEC), and the textural classes <200 μm, and negatively correlated with the coarse sand fraction. The average total C:N ratio was 7.0 in the oxic layer and 6.7 in the anoxic layer, indicating that the C input comes entirely from the microflora. CHCl3-labile C was measured by the fumigation-extraction method and was converted to microbial biomass C (values in brackets). The average content of CHCl3-labile C was 407 μg g−1 (903 μg g−1) in the oxic layer and 214 μg g−1 (476 μg g−1) in the anoxic layer. CHCl3-labile C did not correlate with CEC and the textural classes <200 μm, indicating that conditions other than the physical environment determine this fraction (C input, grazing).

Literature Cited

  • Alongi, D., 1988. Bacterial productivity and microbial biomass in tropical mangrove sediments. —Microb. Ecol.15, 59–79.

    Article  Google Scholar 

  • Anderson, J. P. E. & Domsch, K. H., 1980. Quantities of plant nutrients in the microbial biomass of selected soils. — Soil Sci.130, 211–216.

    CAS  Google Scholar 

  • Anderson, J. G. & Meadows, P. S., 1978. Microenvironments in marine sediments. — Proc. R. Soc. Edinb.76 B, 1–16.

    Google Scholar 

  • Asmus, R., 1982. Field measurements on seasonal variation of the activity of primary producers on a sandy tidal flat in the northern Wadden Sea. — Neth. J. Sea Res.16, 389–402.

    CAS  Google Scholar 

  • Asmus, H. & Asmus, R., 1985. The importance of the grazing food chain for energy flow and production in three intertidal sand bottom communities of the Northern Wadden Sea. — Helgoländer Meeresunters.39, 273–301.

    Article  Google Scholar 

  • Balkwill, D. L., Leach, F. R., Wilson, J. T., McNabb, J. F. & White, D. C., 1988. Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in subsurface aquifer sediments. — Microb. Ecol.16, 73–84.

    Article  CAS  Google Scholar 

  • Cadee, G. C. & Hegeman, J., 1977. Distribution of primary production of the benthic microflora and accumulation of organic matter on a tidal flat area, Balgzand, Dutch Wadden Sea. — Neth. J. Sea Res.11, 24–41.

    CAS  Google Scholar 

  • Findlay, R. H., King, G. M. & Watling, L., 1989. Efficacy of phospholipid analysis in determining microbial biomass in sediments. — Appl. environ. Microbiol.55, 2888–2893.

    CAS  PubMed  Google Scholar 

  • Insam, H., Parkinson, D. & Domsch, K. H., 1989. Influence of macroclimate on soil microbial biomass. — Soil Biol. Biochem.21, 211–221.

    Article  Google Scholar 

  • Inubushi, K., Brookes, P. C. & Jenkinson, D. S., 1991. Soil microbial biomass C, N and ninhydrin-N in aerobic and anaerobic soils measured by the fumigation-extraction method. — Soil Biol. Biochem.24, 737–741.

    Google Scholar 

  • Jenkinson, D. S., 1966. Studies on the decomposition of plant material in soil. II: Partial sterilization of soil and the soil biomass. — J. Soil Sci.17, 280–302.

    CAS  Google Scholar 

  • Jenkinson, D. S., 1988. The determination of microbial biomass carbon and nitrogen in soil. In: Advances in nitrogen cycling in agricultural ecosystems. Ed. by J. R. Wilson. CAB International, Wallingford, 368–386.

    Google Scholar 

  • Jenkinson, D. S. & Ladd, J. N., 1981. Microbial biomass in soil: measurement and turnover. — Soil Biochem.5, 415–471.

    CAS  Google Scholar 

  • Jenkinson, D. S., Harkness, D. D., Vance, E. D., Adams, D. E. & Harrison, A. F., 1992. Calculating net primary production and annual input of organic matter to soil from the amount and radiocarbon content of soil organic matter. — Soil Biol. Biochem.24, 295–308.

    Article  Google Scholar 

  • Joergensen, R. G. & Meyer, B., 1990. Nutrient changes in decomposing beech leaf litter assessed using a solution flux approach. — J. Soil Sci.41, 279–293.

    CAS  Google Scholar 

  • Kaiser, E.-A., Mueller, T., Joergensen, R. G., Insam, H. & Heinemeyer, O., 1992. Evaluation of methods to estimate the soil microbial biomass and the relationship with soil texture and organic matter. — Soil Biol. Biochem.24, 675–683.

    CAS  Google Scholar 

  • Moriarty, D. J. W., Boon, P., Hansen, H., Hunt, W. G., Pointer, I. R., Pollard, P. C., Skrying, G. W. & White, D. C., 1985. Microbial biomass and productivity in seagrass beds. — Geomicrobiol. J.4, 21–51.

    CAS  PubMed  Google Scholar 

  • Mueller, T., Joergensen, R. G. & Meyer, B., 1992. Estimation of soil microbial biomass C in the presence of fresh roots by fumigation-extraction. — Soil Biol. Biochem.24, 179–181.

    Article  Google Scholar 

  • Reise, K., 1985. Tidal flat ecology. Springer, Berlin, 191 pp.

    Google Scholar 

  • Schaefer, M. & Schauermann, J., 1990. The soil fauna of beech forests: comparison between mull and a moder soil. — Pedobiologia34, 299–314.

    Google Scholar 

  • Schlichting, E. & Blume, H. P., 1966. Bodenkundliches Praktikum. Parey, Hamburg, 212 pp.

    Google Scholar 

  • Schwinghamer, P., 1983. Generating ecological hypotheses from biomass spectra using causal analysis: a benthic example. — Mar. Ecol. Prog. Ser.13, 151–166.

    Google Scholar 

  • Vance, E. D., Brookes, P. C. & Jenkinson, D. S., 1987. An extraction method for measuring soil microbial C. — Soil Biol. Biochem.19, 703–708.

    CAS  Google Scholar 

  • Widmer, P., Brookes, P. C. & Parry, L. C., 1989. Microbial biomass nitrogen measurements in soils containing large amounts of inorganic nitrogen. — Soil Biol. Biochem.21, 865–867.

    Article  Google Scholar 

  • Wolters, V. & Joergensen, R. G., 1991. Microbial carbon turnover in beech forest soils at different stages of acidification. — Soil Biol. Biochem.23, 897–902.

    Google Scholar 

  • Wu, J., Joergensen, R. G., Pommerening, B., Chaussod, R. & Brookes, P. C., 1990. Measurement of soil microbial biomass C — an automated procedure. — Soil Biol. Biochem.22, 1167–1169.

    Article  CAS  Google Scholar 

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Joergensen, R.G., Mueller, T. Estimation of the microbial biomass in tidal flat sediment by fumigation-extraction. Helgolander Meeresunters 49, 213–221 (1995). https://doi.org/10.1007/BF02368351

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