DGGE band | Best match (accession no.); similarity (%) | Most closely related sequence from validly described bacterial species (accession no.); similarity (%) | Division/group |
---|---|---|---|
F1a | Ophiolis aculeata symbiont (U63548); 96% | Ruegeria atlantica (D8526); 92% | α Proteobacteria, Roseobacter group |
F2a | O. aculeata symbiont (U63548); 98% | R. gelatinovorans (D8523); 94% | α Proteobacteria, Roseobacter group |
F3a | O. aculeata symbiont (U63548); 96% | R. atlantica (D8526); 92% | α Proteobacteria, Roseobacter group |
F4a | O. aculeata symbiont (U63548); 98% | R. gelatinovorans (D8523); 94% | α Proteobacteria, Roseobacter group |
F5a | Uncultured α Proteobacterium (AF466884); 88% | Ahrensia kieliense (D88524); 81% | Proteobacteria |
F8a | Uncultured α Proteobacterium Shippagan (AF100168); 91% | Staleya guttiformis (Y16427); 90% | α Proteobacteria, Roseobacter group |
F9a | Uncultured Cytophagales (AY033305); 94% | Gelidibacter algens (AF001367); 90% | Bacteroidetes; Flavobacteria |
F10a | Uncultured Cytophagales (AY033305); 94% | G. algens (AF001367); 90% | Bacteroidetes; Flavobacteria |
A4b | Uncultured Roseobacter NAC-11-3 (AF245632); 93% | R. gelatinovorans (D8523); 93% | α Proteobacteria, Roseobacter group |
A5b | Uncultured marine bacterium D015 (AF177555); 97% | R. algicola (X78315); 97% | α Proteobacteria, Roseobacter group |
A6b | Uncultured marine bacterium D015 (AF177555); 98% | R. algicola (X78315); 97% | α Proteobacteria, Roseobacter group |
A7b | Uncultured marine bacterium D015 (AF177555); 98% | R. algicola (X78315); 97% | α Proteobacteria, Roseobacter group |
A8b | Uncultured α Proteobacterium Shippagan (AF100168); 99% | Staleya guttiformis (Y16427); 97% | α Proteobacteria, Roseobacter group |
A10b | Uncultured α Proteobacterium Shippagan (AF100168); 99% | Staleya guttiformis (Y16427); 97% | α Proteobacteria, Roseobacter group |
A11b | Crassostrea virginica symbiont CV1010-362 (AF114485); 96% | R. gelatinovorans (D8523); 95% | α Proteobacteria, Roseobacter group |
A14b | Skeletonema pseudocostatum 16S rRNA (X82155); 98% | Diatoms | |
D1c | Skeletonema pseudocostatum 16S rRNA (X82155); 98% | Diatoms | |
D2c | Skeletonema pseudocostatum 16S rRNA (X82155); 96% | Diatoms | |
D3c | Unidentified picoplankton clone OM20 (U32670); 98% | Skeletonema pseudocostatum 16S rRNA (X82155); 96% | Eukaryota, unclassified plastid |
D4c | Uncultured vent bacterium ML-2d (AF208994); 96% | Skeletonema pseudocostatum 16S rRNA (X82155); 96% | Eukaryota, unclassified plastid |
D5c | Environ. clone OCS20 chloroplast gene (AF001654); 99% | Guillardia theta plastid (AF041468); 96% | Eukaryota, unclassified plastid |
D8c | Skeletonema pseudocostatum 16S rRNA (X82155); 97% | Diatoms |