1. PCR product size amplified by LCO 1490 and HCO 2198 primers is about 709 bp or using HCO 709 primer 719 bp | 2 |
2a. PCR product digested with ApaI enzyme gives the following restriction pattern (in base pairs; Fig. 2): 309 and 400 | M. viridis |
2b. PCR product remains uncut | 3 |
3. PCR product size amplified by 16Sar and 16Sbr primers is about 545 bp | 4 |
4a. PCR product digested with SspI enzyme gives the following restriction pattern (in base pairs; Fig. 2): 227 and 318 | M. neglecta |
4b. PCR product remains uncut | 5 |
5a. PCR product digested with AseI enzyme gives the following restriction pattern (in base pairs; Fig. 2): 237 and 308 | M. arctia |
5b. PCR product remains uncut | 6 |
6. Repeating of the procedure or sequencing of PCR product of either 16S, COI or Cytb is required! There are several possibilities why no cut is visible: either this individual has lost the restriction site by point mutation or it is another species of Marenzelleria (M. wireni or M. bastropi)a |