Table 1 Closest relatives to the sequenced DGGE bands
Band | Host | Similarity (%) | Alignment length | Accession number | Closest relative | Taxonomic affiliation as reported in GenBank |
|---|---|---|---|---|---|---|
Tem_104/59 | Temora sp. field | 99 | 510/511 | EU005307 | Clone G3-45 | Uncultured Alphaproteobacterium |
Tem_104/57 | 99 | 510/511 | ||||
Tem_104/5 | 99 | 473/474 | ||||
Tem_104/46 | 99 | 460/461 | ||||
Tem_104/30 | 99 | 476/477 | ||||
Tem_104/53 | 100 | 435/435 | ||||
Tem_104/40 | 100 | 463/463 | ||||
Tem_104/52 | Temora sp. field | 100 | 465/465 | DQ839261a | DGGE band NS16 | Uncultured Alphaproteobacterium |
Tem_104/39 | 99 | 459/462 | ||||
Tem_104/45 | 99 | 460/464 | ||||
Tem_104/56 | 98 | 484/490 | ||||
Tem_104/44 | Temora sp. field | 97 | 439/451 | DQ839261a | DGGE band NS16 | Uncultured Alphaproteobacterium |
Tem_104/50 | Temora sp. field | 97 | 510/522 | EF215784 | Clone PV2-37 | Uncultured Bacteroidetes |
Tem_104/51 | Temora sp. field | 91 | 496/540 | DQ831068 | Isolate LP-OTU63 | Uncultured Bacteroidetes |
Aca_104/21 | Acartia sp. lab | 98 | 452/459 | DQ372849 | Clone NH10_29 | Uncultured Alphaproteobacterium |
Aca_104/22 | Acartia sp. lab | 97 | 442/453 | DQ372849 | Clone NH10_29 | Uncultured Alphaproteobacterium |
Aca_104/48 | Acartia sp. lab | 96 | 412/426 | DQ372849 | Clone NH10_29 | Uncultured Alphaproteobacterium |
Aca_104/36 | Acartia sp. lab | 95 | 402/420 | DQ395758 | Clone ctg_CGOF389 | Uncultured Alphaproteobacterium |
Aca_104/1 | Acartia sp. field | 96 | 440/454 | DQ234217 | Clone DS134 | Uncultured Alphaproteobacterium |
Aca_104/37 | Acartia sp. field | 93 | 443/472 | DQ911789 | DGGE band GB03-a10-p | Uncultured Deltaproteobacterium |